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  5. LOC_Os01g52570.1

LOC_Os01g52570.1 (LOC_Os01g52570)


Aliases : LOC_Os01g52570

Description : Lachrymatory-factor synthase OS=Allium cepa (sp|p59082|lfs_allce : 95.5)


Gene families : OG0001211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52570.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Ala_g09081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g50385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G104400.1 Ceric.02G104400 not classified & original description: pacid=50585850... 0.02 OrthoFinder output from all 47 species
Ceric.05G013400.1 Ceric.05G013400 not classified & original description: pacid=50578169... 0.03 OrthoFinder output from all 47 species
Ceric.1Z077100.1 Ceric.1Z077100 not classified & original description: pacid=50573381... 0.03 OrthoFinder output from all 47 species
Ceric.1Z118400.1 Ceric.1Z118400 not classified & original description: pacid=50604680... 0.02 OrthoFinder output from all 47 species
Ceric.39G050400.1 Ceric.39G050400 not classified & original description: pacid=50582826... 0.03 OrthoFinder output from all 47 species
Ceric.39G051500.1 Ceric.39G051500 not classified & original description: pacid=50582474... 0.02 OrthoFinder output from all 47 species
Ceric.39G052000.1 Ceric.39G052000 not classified & original description: pacid=50583388... 0.03 OrthoFinder output from all 47 species
Gb_02243 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_13846 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20236 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g15056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g05710.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g11680.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g12910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066420.1.1 Solyc08g066420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR019587 Polyketide_cyclase/dehydratase 76 214
No external refs found!