LOC_Os01g52560.1 (PEN3, ABCG36, ATPDR8,...)

Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8, LOC_Os01g52560

Description : subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g52560.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00242220	ATPDR3, PDR3,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00122p00119310	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT2G36380	PDR6, ATPDR6	pleiotropic drug resistance 6	0.1	OrthoFinder output from all 47 species
Adi_g035578	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g106367	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14772	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g34217	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g52910	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g23935	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27569	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g28174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g30586	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g31181	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g06909	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18617	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20545	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37088	PDR11, ATPDR11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g10025	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g32414	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g12912	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g13610	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g37574	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g15145	ATPDR7, PDR7	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01016999001	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
GSVIVT01017198001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017204001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017336001	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017676001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01024743001	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01034746001	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01034748001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Len_g09754	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_10433422g0010	ATPDR3, PDR3	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_18770g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_249533g0010	ATPDR3, PDR3	ABC transporter G family member 31 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_878041g0010	PDR1, ATPDR1	ABC transporter G family member 29 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_964768g0010	ABCG40, PDR12,...	ABC transporter G family member 39 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Mp4g05490.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Msp_g23278	PDR1, ATPDR1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g34956	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g47531	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05895	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g22919	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g11416	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g38837	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c18_21520V3.1	PDR1, ATPDR1,...	ABC-2 and Plant PDR ABC-type transporter family protein	0.01	OrthoFinder output from all 47 species
Ppi_g40984	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002637	PDR6, ATPDR6	subfamily ABCG transporter & original description: CDS=213-4610	0.02	OrthoFinder output from all 47 species
Sam_g37860	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50121	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo101338	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Smo118688	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo412699	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo412710	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo417263	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo417266	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Smo441717	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo441722	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo96758	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Solyc12g100190.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Spa_g06968	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g56833	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31248	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g32214	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003743_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e006460_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Zm00001e016714_P002	PDR4, ATPDR4,...	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e024257_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e030669_P001	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e037233_P001	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	412	474
IPR003439	ABC_transporter-like_ATP-bd	586	737
IPR013525	ABC_2_trans	883	1096
IPR013525	ABC_2_trans	196	406

External Links

No external refs found!

LOC_Os01g52560.1 (PEN3, ABCG36, ATPDR8,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation