Aliases : LOC_Os01g52550
Description : subfamily ABCB transporter
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00045p00108620 | PGP11,... | Solute transport.primary active transport.ABC... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00045p00109790 | PGP11,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
Aev_g18719 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g29915 | PGP1, ABCB1, ATPGP1 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0002.g001326 | PGP20 | subfamily ABCB transporter & original description: CDS=439-4584 | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000025.1 | ATPGP4, PGP4, ABCB4, MDR4 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g13730 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01000580001 | No alias | ABC transporter B family member 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g18670.1 | PGP21, LOC_Os01g18670 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g05710.1 | ABCB14,... | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Len_g18141 | PGP10 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g47394 | PGP2 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_40328g0010 | PGP20 | ABC transporter B family member 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g26680 | PGP11 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g03992 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g51926 | ATPGP4, PGP4, ABCB4, MDR4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0214.g026004 | No alias | subfamily ABCB transporter & original description: CDS=930-4592 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g34567 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g087410.4.1 | Solyc02g087410 | subfamily ABCB transporter | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g093650.3.1 | Solyc03g093650 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g010310.4.1 | PGP20, Solyc04g010310 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020073_P001 | ATPGP4, PGP4,... | subfamily ABCB transporter | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e026434_P002 | PGP11, Zm00001e026434 | subfamily ABCB transporter | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e041087_P002 | Zm00001e041087 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
No external refs found! |