- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os01g52090
Description : transcription factor (Trihelix)
Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g52090.1 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G11100 | No alias | sequence-specific DNA binding transcription factors | 0.03 | OrthoFinder output from all 47 species | |
| AT3G24490 | No alias | Alcohol dehydrogenase transcription factor Myb/SANT-like... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g14961 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.38G044200.1 | Ceric.38G044200 | Trihelix-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.38G051400.1 | Ceric.38G051400 | Trihelix-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_16931 | No alias | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_16932 | No alias | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| MA_4997g0010 | No alias | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g09730.1 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g06290.1 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11197 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g07545 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g07782 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06377 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g122030.1.1 | Solyc03g122030 | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g018350.4.1 | Solyc05g018350 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g010890.2.1 | Solyc12g010890 | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |