1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g49900.1

LOC_Os01g49900.1 (LOC_Os01g49900)


Aliases : LOC_Os01g49900

Description : cPTH plastidial RNA splicing factor


Gene families : OG0001693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g49900.1

Target Alias Description ECC score Gene Family Method Actions
Dde_g14720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41554 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008257001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Len_g09494 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g16591 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g17021 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.06 OrthoFinder output from all 47 species
Solyc02g086150.4.1 Solyc02g086150 component CRS2 of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001328 Pept_tRNA_hydro 57 234
No external refs found!