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  5. LOC_Os01g49770.1

LOC_Os01g49770.1 (LOC_Os01g49770)


Aliases : LOC_Os01g49770

Description : E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana (sp|o49500|mbr2_arath : 126.0)


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g49770.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g28197 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene01885.t1 Aspi01Gene01885 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G051600.1 Ceric.22G051600 regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.06 OrthoFinder output from all 47 species
Dcu_g20451 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g11830 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01022103001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01022106001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Len_g29893 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g38713 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g42399 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.05 OrthoFinder output from all 47 species
Pnu_g13020 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.04 OrthoFinder output from all 47 species
Solyc03g118840.3.1 Solyc03g118840 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Tin_g15018 No alias regulatory E3 ubiquiTin ligase (MREL/JUL) of microtubule... 0.03 OrthoFinder output from all 47 species
Zm00001e013125_P002 Zm00001e013125 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 153 195
No external refs found!