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  5. LOC_Os01g48620.1

LOC_Os01g48620.1 (LOC_Os01g48620)


Aliases : LOC_Os01g48620

Description : no hits & (original description: none)


Gene families : OG0001127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48620.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aev_g30015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66885.t1 Aspi01Gene66885 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014344001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01014347001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01017205001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04948 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_23466 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g48660.1 LOC_Os01g48660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g23481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_42423g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g18570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo430582 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc12g042960.3.1 Solyc12g042960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020168_P001 Zm00001e020168 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021319 DUF2921 35 883
No external refs found!