AMTR_s00003p00264590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.362

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase


Gene families : OG_01_0001739 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001739_tree ,
OG_02_0001723 (LandPlants) Phylogenetic Tree(s): OG_02_0001723_tree ,
OG_03_0001595 (SeedPlants) Phylogenetic Tree(s): OG_03_0001595_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00264590
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001497.8 No alias Lysine-specific histone demethylase 1 homolog 2 OS=Oryza... 0.01 Archaeplastida
LOC_Os04g47270.1 No alias lysine-specific demethylase (LDL/KDM1) 0.03 Archaeplastida
Mp8g11530.1 No alias lysine-specific demethylase (LDL/KDM1) 0.02 Archaeplastida
Smo79938 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Zm00001e015890_P001 No alias lysine-specific demethylase (LDL/KDM1) 0.03 Archaeplastida
Gb_40551 No alias lysine-specific demethylase (LDL/KDM1) 0.02 LandPlants
LOC_Os04g47270.1 No alias lysine-specific demethylase (LDL/KDM1) 0.03 LandPlants
MA_14874g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.02 LandPlants
MA_1921g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.02 LandPlants
Smo79938 No alias Chromatin organisation.histone modifications.histone... 0.02 LandPlants
Zm00001e015890_P001 No alias lysine-specific demethylase (LDL/KDM1) 0.02 LandPlants
GSVIVT01016218001 No alias Chromatin organisation.histone modifications.histone... 0.02 SeedPlants
Gb_40551 No alias lysine-specific demethylase (LDL/KDM1) 0.02 SeedPlants
LOC_Os04g47270.1 No alias lysine-specific demethylase (LDL/KDM1) 0.03 SeedPlants
MA_14874g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.02 SeedPlants
MA_1921g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007526 SWIRM 56 140
IPR002937 Amino_oxidase 166 593
No external refs found!