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  5. LOC_Os01g48370.1

LOC_Os01g48370.1 (AtTLP7, TLP7, LOC_Os01g48370)


Aliases : AtTLP7, TLP7, LOC_Os01g48370

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48370.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00153680 AtTLP3, TLP3,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
AMTR_s00130p00115490 AtTLP7, TLP7,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
AT3G06380 TLP9, ATTLP9 tubby-like protein 9 0.03 OrthoFinder output from all 47 species
Adi_g008982 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080083 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z003500.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G011000.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g05701 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27792 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00511 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31683 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024249 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14642 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g074510.3.1 AtTLP3, TLP3,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Solyc10g046970.2.1 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e028052_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 98 351
No external refs found!