Aliases : LOC_Os01g47740
Description : Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza sativa subsp. japonica (sp|q5qlr5|zfp1_orysj : 975.0)
Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00034p00079510 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene68652.t1 | Aspi01Gene68652 | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.03G023000.1 | Ceric.03G023000 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.26G058500.1 | Ceric.26G058500 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g32925 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g09181 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009465001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Gb_24355 | No alias | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Len_g29893 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g02231 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
MA_35916g0010 | No alias | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g09951 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g24167 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0065.g015971 | No alias | not classified & original description: CDS=4183-6075 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0138.g022510 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39427 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g52630 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g078680.4.1 | Solyc04g078680 | Probable E3 ubiquitin-protein ligase RHG1A... | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g007140.3.1 | Solyc10g007140 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g31415 | No alias | RING-H2-class CTL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013125_P002 | Zm00001e013125 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013672_P001 | Zm00001e013672 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e028021_P003 | Zm00001e028021 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028107_P001 | Zm00001e028107 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 471 | 513 |
No external refs found! |