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  5. LOC_Os01g47540.1

LOC_Os01g47540.1 (SSP4, LOC_Os01g47540)


Aliases : SSP4, LOC_Os01g47540

Description : RNA polymerase-II phosphatase. subcluster B phosphatase


Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47540.1

Target Alias Description ECC score Gene Family Method Actions
Cre09.g391541 SSP5 Protein modification.dephosphorylation.aspartate-based... 0.01 OrthoFinder output from all 47 species
GSVIVT01001951001 SSP4b Protein modification.dephosphorylation.aspartate-based... 0.04 OrthoFinder output from all 47 species
Gb_40540 SSP5 RNA polymerase-II phosphatase. subcluster B phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e020400_P002 SSP4, Zm00001e020400 RNA polymerase-II phosphatase. subcluster B phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 261 421
No external refs found!