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  5. LOC_Os01g47410.1

LOC_Os01g47410.1 (ATAPA1, APA1, LOC_Os01g47410)


Aliases : ATAPA1, APA1, LOC_Os01g47410

Description : pepsin-type protease


Gene families : OG0000857 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47410.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00122510 ATAPA1, APA1,... Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
AT4G04460 No alias Saposin-like aspartyl protease family protein 0.04 OrthoFinder output from all 47 species
Als_g02420 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031327001 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01031329001 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
Lfl_g08922 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Mp4g21390.1 ATAPA1, APA1 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Mp8g14360.1 ATAPA1, APA1 pepsin-type protease 0.02 OrthoFinder output from all 47 species
Msp_g05401 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Pir_g44304 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Pir_g60457 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Zm00001e020391_P004 ATAPA1, APA1,... pepsin-type protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008138 SapB_2 331 364
IPR007856 SapB_1 395 431
IPR033121 PEPTIDASE_A1 97 521
No external refs found!