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  5. LOC_Os01g47370.1

LOC_Os01g47370.1 (LOC_Os01g47370)


Aliases : LOC_Os01g47370

Description : transcription factor (MYB-related)


Gene families : OG0002893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47370.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00096080 RL1, RSM2,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00108p00066140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01031975001 RL1, RSM2, ATRL1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031982001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os12g33950.1 LOC_Os12g33950 transcription factor (MYB-related) 0.07 OrthoFinder output from all 47 species
MA_16729g0010 RL1, RSM2, ATRL1 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
MA_488767g0010 RL1, RSM2, ATRL1 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e028003_P001 RL1, RSM2,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 19 64
No external refs found!