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  5. LOC_Os01g47340.1

LOC_Os01g47340.1 (ISU1, ATISU1, LOC_Os01g47340)


Aliases : ISU1, ATISU1, LOC_Os01g47340

Description : scaffold component ISU1/2/3 of mitochondrial ISC system assembly phase


Gene families : OG0002782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47340.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g015149 ISU1, ATISU1 scaffold component *(ISU1/2/3) of mitochondrial ISC... 0.02 OrthoFinder output from all 47 species
Dcu_g40019 ISU1, ATISU1 scaffold component *(ISU1/2/3) of mitochondrial ISC... 0.04 OrthoFinder output from all 47 species
Dde_g17674 ISU1, ATISU1 scaffold component *(ISU1/2/3) of mitochondrial ISC... 0.02 OrthoFinder output from all 47 species
Gb_07830 ISU1, ATISU1 scaffold component ISU1/2/3 of mitochondrial ISC system... 0.03 OrthoFinder output from all 47 species
MA_36980g0010 ISU1, ATISU1 scaffold component ISU1/2/3 of mitochondrial ISC system... 0.02 OrthoFinder output from all 47 species
Pp3c11_3040V3.1 ISU1, ATISU1, Pp3c11_3040 SufE/NifU family protein 0.01 OrthoFinder output from all 47 species
Sam_g35038 No alias scaffold component *(ISU1/2/3) of mitochondrial ISC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002871 NIF_FeS_clus_asmbl_NifU_N 33 158
No external refs found!