LOC_Os01g47180.1 (LOC_Os01g47180)

Aliases : LOC_Os01g47180

Description : Werner Syndrome-like exonuclease OS=Arabidopsis thaliana (sp|q84lh3|wex_arath : 99.0)

Gene families : OG0000913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000913_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g47180.1
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AT3G12410	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.01	OrthoFinder output from all 47 species
AT3G12440	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.06	OrthoFinder output from all 47 species
Cba_g03885	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e019881_P001	Zm00001e019881	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002562	3'-5'_exonuclease_dom	105	269

External Links

No external refs found!