LOC_Os01g47180.1 (LOC_Os01g47180)


Aliases : LOC_Os01g47180

Description : Werner Syndrome-like exonuclease OS=Arabidopsis thaliana (sp|q84lh3|wex_arath : 99.0)


Gene families : OG0000913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000913_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47180.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT3G12410 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.01 OrthoFinder output from all 47 species
AT3G12440 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.06 OrthoFinder output from all 47 species
Cba_g03885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019881_P001 Zm00001e019881 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002562 3'-5'_exonuclease_dom 105 269
No external refs found!