LOC_Os01g46926.1 (UBC9, LOC_Os01g46926)


Aliases : UBC9, LOC_Os01g46926

Description : conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46926.1

Target Alias Description ECC score Gene Family Method Actions
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.02 OrthoFinder output from all 47 species
AT4G27960 UBC9 ubiquitin conjugating enzyme 9 0.09 OrthoFinder output from all 47 species
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.04 OrthoFinder output from all 47 species
Ala_g02992 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g32602 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06017 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06450 UBC9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10989 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23200 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39862 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43928 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08036.t1 ATUBC11, UBC11,... E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10121.t1 UBC10, Aspi01Gene10121 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043330 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0096.g043744 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0123.g048365 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053654 UBC9 E2 MUB ubiquitin-conjugating enzyme & original... 0.02 OrthoFinder output from all 47 species
Cba_g32592 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G065800.1 UBC10, Ceric.03G065800 E2 MUB ubiquitin-conjugating enzyme & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01025872001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Len_g18731 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49896 UBC28 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
MA_13020g0010 UBC10 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Mp3g18170.1 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Mp7g03500.1 EMB144, CIN4, COP10, FUS9 conjugation E2 protein. E2 conjugating component COP10... 0.03 OrthoFinder output from all 47 species
Msp_g37865 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48734 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g55798 ATUBC11, UBC11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12242 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006304 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018057 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.02 OrthoFinder output from all 47 species
Solyc05g050230.4.1 UBC10, Solyc05g050230 Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc06g007510.3.1 UBC10, Solyc06g007510 conjugation E2 protein 0.06 OrthoFinder output from all 47 species
Spa_g21785 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33883 UBC9 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020271_P001 UBC9, Zm00001e020271 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e035345_P001 EMB144, CIN4,... E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!