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  5. LOC_Os01g45730.1

LOC_Os01g45730.1 (LOC_Os01g45730)


Aliases : LOC_Os01g45730

Description : C3H zinc finger transcription factor


Gene families : OG0003489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g45730.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT1G66810 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from all 47 species
AT1G68200 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.08 OrthoFinder output from all 47 species
GSVIVT01011819001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01022264001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030969001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.09 OrthoFinder output from all 47 species
Mp4g14530.1 No alias C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Pir_g54698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo112852 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Solyc05g008670.3.1 Solyc05g008670 C3H zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Spa_g48187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 259 284
No external refs found!