1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g44310.1

LOC_Os01g44310.1 (LOC_Os01g44310)


Aliases : LOC_Os01g44310

Description : clathrin uncoating protein (AUL)


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g44310.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT4G36520 No alias Chaperone DnaJ-domain superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g46222 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06212 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020330 No alias clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021144 No alias clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14277 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40756 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g082840.4.1 Solyc06g082840 clathrin uncoating protein (AUL) 0.06 OrthoFinder output from all 47 species
Spa_g30074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020383_P002 Zm00001e020383 clathrin uncoating protein (AUL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!