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  5. LOC_Os01g44240.1

LOC_Os01g44240.1 (LOC_Os01g44240)


Aliases : LOC_Os01g44240

Description : no hits & (original description: none)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g44240.1

Target Alias Description ECC score Gene Family Method Actions
AT3G10815 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g08904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g11430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.05 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.42 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g13373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Dde_g26594 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_12946 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g16162 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_41001g0010 RHC2A Probable E3 ubiquitin-protein ligase RHC2A... 0.03 OrthoFinder output from all 47 species
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
Msp_g34982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10219 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002229 No alias not classified & original description: CDS=1-1332 0.03 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09700 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 86 133
No external refs found!