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  5. LOC_Os01g43440.1

LOC_Os01g43440.1 (TMM, AtRLP17, LOC_Os01g43440)


Aliases : TMM, AtRLP17, LOC_Os01g43440

Description : EPF-peptide receptor (TMM)


Gene families : OG0012146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g43440.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G070200.1 TMM, AtRLP17,... EPF-peptide co-receptor *(TMM) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_10165 TMM, AtRLP17 EPF-peptide receptor (TMM) 0.07 OrthoFinder output from all 47 species
Solyc12g042760.1.1 TMM, AtRLP17,... EPF-peptide receptor (TMM) 0.04 OrthoFinder output from all 47 species
Zm00001e020427_P001 TMM, AtRLP17,... EPF-peptide receptor (TMM) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 257 315
IPR001611 Leu-rich_rpt 165 222
IPR001611 Leu-rich_rpt 355 377
No external refs found!