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  5. LOC_Os01g42980.1

LOC_Os01g42980.1 (LOC_Os01g42980)


Aliases : LOC_Os01g42980

Description : component mtRPL22 of large ribosomal subunit proteome


Gene families : OG0005689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42980.1

Target Alias Description ECC score Gene Family Method Actions
AT4G28360 No alias Ribosomal protein L22p/L17e family protein 0.1 OrthoFinder output from all 47 species
Aop_g14639 No alias component *(bL22m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre05.g242950 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_36607 No alias component mtRPL22 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
MA_67650g0010 No alias component mtRPL22 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp1g21100.1 No alias component mtRPL22 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Pir_g64774 No alias component *(bL22m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g08750 No alias component *(bL22m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc04g017680.3.1 Solyc04g017680 component mtRPL22 of large ribosomal subunit proteome 0.17 OrthoFinder output from all 47 species
Spa_g10569 No alias component *(bL22m) of large mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Zm00001e009387_P001 Zm00001e009387 component mtRPL22 of large ribosomal subunit proteome 0.24 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 124 225
No external refs found!