LOC_Os01g42960.1 (TTL1, LOC_Os01g42960)


Aliases : TTL1, LOC_Os01g42960

Description : scaffold protein (TTL) of brassinosteroid signalling


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42960.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00174p00014780 TTL3, VIT,... Inactive TPR repeat-containing thioredoxin TTL3... 0.02 OrthoFinder output from all 47 species
AT1G53300 TTL1 tetratricopetide-repeat thioredoxin-like 1 0.04 OrthoFinder output from all 47 species
AT1G78120 TPR12 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10090 TPR13 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08772 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14242 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G063800.1 TTL1, Ceric.02G063800 not classified & original description: pacid=50585538... 0.03 OrthoFinder output from all 47 species
Ceric.27G040400.1 TTL3, VIT,... not classified & original description: pacid=50605732... 0.03 OrthoFinder output from all 47 species
Dac_g14546 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15649 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08484 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01014216001 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01020699001 TTL3, VIT Inactive TPR repeat-containing thioredoxin TTL3... 0.04 OrthoFinder output from all 47 species
Len_g08161 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18412 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426265g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species
Msp_g35116 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01359 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17078 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015765 TTL1 not classified & original description: CDS=75-2582 0.04 OrthoFinder output from all 47 species
Smo168306 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g055000.3.1 TPR14, Solyc04g055000 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g073940.4.1 TPR14, Solyc04g073940 Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
Solyc07g062580.4.1 TTL1, Solyc07g062580 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species
Spa_g03799 TTL3, VIT not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16173 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020701_P001 TTL1, Zm00001e020701 scaffold protein (TTL) of brassinosteroid signalling 0.06 OrthoFinder output from all 47 species
Zm00001e026052_P001 TTL1, Zm00001e026052 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001440 TPR_1 491 522
IPR013766 Thioredoxin_domain 604 672
IPR013105 TPR_2 220 247
No external refs found!