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  5. LOC_Os01g42140.1

LOC_Os01g42140.1 (LOC_Os01g42140)


Aliases : LOC_Os01g42140

Description : no hits & (original description: none)


Gene families : OG0007044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42140.1

Target Alias Description ECC score Gene Family Method Actions
AT2G01410 No alias NHL domain-containing protein 0.03 OrthoFinder output from all 47 species
Dcu_g22682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!