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Aliases : LOC_Os01g41880
Description : RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum (sp|q9sq56|rgga_tobac : 98.6)
Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G17520 | No alias | Hyaluronan / mRNA binding family | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g025028 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035907 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117739 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18185 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g20955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04685 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g30074 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001594 | No alias | not classified & original description: CDS=186-1532 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0370.g067077 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G019400.1 | Ceric.01G019400 | regulatory protein *(RGG) of mRNA quality control &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01018290001 | No alias | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12236 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13516 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g51407 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_141447g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10018 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06151 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0128.g021917 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g090190.3.1 | Solyc01g090190 | RGG repeats nuclear RNA binding protein A OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g27274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019955_P001 | Zm00001e019955 | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019958_P002 | Zm00001e019958 | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e026661_P002 | Zm00001e026661 | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |