LOC_Os01g41120.1 (LOC_Os01g41120)


Aliases : LOC_Os01g41120

Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g41120.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.05 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.07 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.09 OrthoFinder output from all 47 species
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.1 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.08 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Adi_g016368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085610 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37061 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43377 LRX2 component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26231 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04968 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10583 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18349 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21238 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00475.t1 LRX2, Aspi01Gene00475 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene03958.t1 LRX2, Aspi01Gene03958 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene28758.t1 Aspi01Gene28758 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33154.t1 Aspi01Gene33154 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene53230.t1 LRX2, Aspi01Gene53230 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.08 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.07 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.05 OrthoFinder output from all 47 species
Azfi_s0050.g031015 No alias LRR-domain extensin & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046029 No alias LRR-domain extensin & original description: CDS=1-1872 0.07 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.25G069300.1 LRX2, Ceric.25G069300 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07517 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01171 LRX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31890 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Gb_12380 No alias LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_29819 LRX2 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.08 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.08 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.06 OrthoFinder output from all 47 species
Len_g24034 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28005 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.03 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32219 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11374 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17372 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g27951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09607 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13602 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.02 OrthoFinder output from all 47 species
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 OrthoFinder output from all 47 species
Solyc01g107790.2.1 Solyc01g107790 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.08 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Solyc11g005150.3.1 LRX2, Solyc11g005150 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26188 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g33020 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g51371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02020 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46219 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.09 OrthoFinder output from all 47 species
Zm00001e007641_P001 Zm00001e007641 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.1 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.05 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 144 202
IPR001611 Leu-rich_rpt 286 343
No external refs found!