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  5. LOC_Os01g38990.1

LOC_Os01g38990.1 (LOC_Os01g38990)


Aliases : LOC_Os01g38990

Description : solute transporter (MTCC)


Gene families : OG0002275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g38990.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Aop_g20964 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25254 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17468.t1 Aspi01Gene17468 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37687.t1 Aspi01Gene37687 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046851 No alias solute transporter *(MTCC) & original description: CDS=1-1047 0.04 OrthoFinder output from all 47 species
Dde_g03791 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015230001 No alias Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
Gb_01696 No alias solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Len_g41599 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
MA_138387g0010 No alias solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Ppi_g31568 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g008770.2.1 Solyc12g008770 solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species
Spa_g21099 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30425 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 29 117
IPR018108 Mitochondrial_sb/sol_carrier 125 224
IPR018108 Mitochondrial_sb/sol_carrier 232 325
No external refs found!