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  5. LOC_Os01g38970.1

LOC_Os01g38970.1 (CARB, LOC_Os01g38970)


Aliases : CARB, LOC_Os01g38970

Description : large subunit of carbamoyl phosphate synthetase heterodimer. large subunit of carbamoyl phosphate synthetase heterodimer


Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os01g38970.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.99 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.01 OrthoFinder output from all 47 species
Cre08.g358580 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.01 OrthoFinder output from all 47 species
MA_10329277g0010 CARB Carbamoyl-phosphate synthase large chain, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_10333529g0010 CARB Carbamoyl-phosphate synthase large chain, chloroplastic... 0.02 OrthoFinder output from all 47 species
Pir_g17083 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Pp3c2_19430V3.1 CARB, Pp3c2_19430 carbamoyl phosphate synthetase B 0.02 OrthoFinder output from all 47 species
Solyc06g075340.4.1 CARB, Solyc06g075340 large subunit of carbamoyl phosphate synthetase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011607 MGS-like_dom 1041 1127
IPR005480 CarbamoylP_synth_lsu_oligo 498 617
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 756 960
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 198 405
No external refs found!