1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g37820.1

LOC_Os01g37820.1 (LOC_Os01g37820)


Aliases : LOC_Os01g37820

Description : no hits & (original description: none)


Gene families : OG0003008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g37820.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00206170 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00171p00041870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G29400 No alias Protein of unknown function (DUF3531) 0.07 OrthoFinder output from all 47 species
AT5G08400 No alias Protein of unknown function (DUF3531) 0.07 OrthoFinder output from all 47 species
Adi_g022841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G067200.1 Ceric.14G067200 not classified & original description: pacid=50634031... 0.05 OrthoFinder output from all 47 species
Dde_g08067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034332001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_09567 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_14630 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g01238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g04100.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo74924 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc08g081080.3.1 Solyc08g081080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g045310.2.1 Solyc10g045310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g07574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023539_P002 Zm00001e023539 Homeobox-leucine zipper protein HOX32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e027738_P003 Zm00001e027738 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 130 271
No external refs found!