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  5. LOC_Os01g37490.1

LOC_Os01g37490.1 (LOC_Os01g37490)


Aliases : LOC_Os01g37490

Description : no hits & (original description: none)


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g37490.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT1G23220 No alias Dynein light chain type 1 family protein 0.05 OrthoFinder output from all 47 species
AT4G27360 No alias Dynein light chain type 1 family protein 0.02 OrthoFinder output from all 47 species
AT5G20110 No alias Dynein light chain type 1 family protein 0.04 OrthoFinder output from all 47 species
Aev_g07037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32570.t1 Aspi01Gene32570 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32678 No alias light chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Dcu_g48500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014353001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034075001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42502 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017907 No alias light chain of Dynein microtubule-based motor protein... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018319 No alias not classified & original description: CDS=791-1699 0.02 OrthoFinder output from all 47 species
Spa_g07930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015738_P001 Zm00001e015738 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 120 204
No external refs found!