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  5. LOC_Os01g36860.1

LOC_Os01g36860.1 (ATDRH1, DRH1, LOC_Os01g36860)


Aliases : ATDRH1, DRH1, LOC_Os01g36860

Description : DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica (sp|q5jkf2|rh40_orysj : 736.0)


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g36860.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00263980 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder output from all 47 species
AMTR_s00096p00079870 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G55150 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
AT3G06480 No alias DEAD box RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Adi_g020035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020036 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024667 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.04 OrthoFinder output from all 47 species
Adi_g036389 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074120 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42061 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18220 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22206 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32867 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Als_g33054 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09685 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016084 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.04 OrthoFinder output from all 47 species
Cba_g10365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38235 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68173 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G038500.1 Ceric.21G038500 regulatory RNA helicase *(RH20/RH30) of virus... 0.08 OrthoFinder output from all 47 species
Ceric.27G030300.1 ATDRH1, DRH1,... not classified & original description: pacid=50605657... 0.04 OrthoFinder output from all 47 species
Dac_g40258 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10539 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25686 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Dcu_g41933 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.05 OrthoFinder output from all 47 species
Dde_g13022 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Ehy_g17995 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20062 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016847001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.05 OrthoFinder output from all 47 species
GSVIVT01032442001 ATDRH1, DRH1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Lfl_g05034 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13618 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
MA_10432707g0010 ATDRH1, DRH1 DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_19015g0010 No alias pre-mRNA splicing regulator (DDX5) 0.04 OrthoFinder output from all 47 species
Mp3g07940.1 No alias pre-mRNA splicing regulator (DDX5) 0.05 OrthoFinder output from all 47 species
Nbi_g18088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08678 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19068 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Pir_g15938 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10603 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Pnu_g12189 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16131 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Ppi_g14840 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017597 ATDRH1, DRH1 not classified & original description: CDS=159-3038 0.02 OrthoFinder output from all 47 species
Sam_g24783 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Sam_g29066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g057760.4.1 Solyc01g057760 DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc03g112350.4.1 Solyc03g112350 pre-mRNA splicing regulator (DDX5) 0.05 OrthoFinder output from all 47 species
Solyc12g044860.3.1 Solyc12g044860 DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g56211 ATDRH1, DRH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e011376_P001 Zm00001e011376 ATP-dependent RNA helicase-like protein DB10... 0.1 OrthoFinder output from all 47 species
Zm00001e016546_P001 Zm00001e016546 pre-mRNA splicing regulator (DDX5) 0.04 OrthoFinder output from all 47 species
Zm00001e016763_P001 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e020727_P006 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
Zm00001e020972_P005 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e027719_P003 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 380 489
IPR011545 DEAD/DEAH_box_helicase_dom 174 343
No external refs found!