LOC_Os08g01700 (Os08g0108500)


Aliases : Os08g0108500

Description : 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family HECATE 3 (HEC3)


Gene families : OG_01_0000523 (Gene family) Phylogenetic Tree(s): OG0000523_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g01700
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Gene family
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Gene family
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Gene family
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Gene family
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Gene family
MA_10156436g0010 No alias No description available 0.02 Gene family
Smo409967 PACid_15406316 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Solyc02g090950.1.1 Solyc02g090950.1 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.01 Gene family
Solyc03g044460.1.1 Solyc03g044460.1 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Solyc09g005070.1.1 Solyc09g005070.1 No description available 0.02 Gene family
Solyc11g005780.2.1 Solyc11g005780.2 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d035027 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.05 Gene family
Zm00001d038863 GRMZM2G094892 No description available 0.04 Gene family
Zm00001d043699 GRMZM2G111666 No description available 0.02 Gene family
Zm00001d049721 GRMZM2G354618,... 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family
Zm00001d050016 GRMZM2G471635 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 173 212
No external refs found!