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  5. LOC_Os01g34610.1

LOC_Os01g34610.1 (LOC_Os01g34610)


Aliases : LOC_Os01g34610

Description : no hits & (original description: none)


Gene families : OG0002725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g34610.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g030213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074752 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29233 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70158.t1 Aspi01Gene70158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024707 No alias CENH3-recruitment factor *(KNL2) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G056500.1 Ceric.14G056500 CENH3-recruitment factor *(KNL2) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g12068 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29417 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08207 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430113g0010 No alias CENH3-recruitment factor (KNL2/Mis18) 0.04 OrthoFinder output from all 47 species
Msp_g18449 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11386 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15711 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32051 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50900 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR015216 SANTA 30 119
No external refs found!