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  5. LOC_Os01g33350.1

LOC_Os01g33350.1 (LOC_Os01g33350)


Aliases : LOC_Os01g33350

Description : transcription factor (PLATZ)


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g33350.1

Target Alias Description ECC score Gene Family Method Actions
AT1G21000 No alias PLATZ transcription factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g024352 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050234 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110975 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001279001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01012050001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
LOC_Os09g02790.1 LOC_Os09g02790 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
LOC_Os09g03080.1 LOC_Os09g03080 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Spa_g21762 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001922_P001 Zm00001e001922 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Zm00001e026325_P001 Zm00001e026325 transcription factor (PLATZ) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 65 146
No external refs found!