LOC_Os01g33030.1 (LOC_Os01g33030)


Aliases : LOC_Os01g33030

Description : component ARPF2 of ARPF2-ARRS1 complex


Gene families : OG0006885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006885_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g33030.1

Target Alias Description ECC score Gene Family Method Actions
AT3G23620 No alias Ribosomal RNA processing Brix domain protein 0.11 OrthoFinder output from all 47 species
Adi_g009091 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Aop_g12213 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0388.g067595 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.36 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g197000 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dcu_g02531 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01033782001 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
Gb_27395 No alias component ARPF2 of ARPF2-ARRS1 complex 0.03 OrthoFinder output from all 47 species
Mp4g01500.1 No alias component ARPF2 of ARPF2-ARRS1 complex 0.09 OrthoFinder output from all 47 species
Pp3c4_19370V3.1 Pp3c4_19370 Ribosomal RNA processing Brix domain protein 0.03 OrthoFinder output from all 47 species
Sam_g11434 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Smo73689 No alias Ribosome production factor 2 homolog OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Solyc10g083600.2.1 Solyc10g083600 component ARPF2 of ARPF2-ARRS1 complex 0.11 OrthoFinder output from all 47 species
Zm00001e032080_P001 Zm00001e032080 component ARPF2 of ARPF2-ARRS1 complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 36 232
No external refs found!