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Aliases : LBD41, LOC_Os01g32770
Description : transcription factor (AS2/LOB)
Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00079p00088960 | LBD41,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00137p00051070 | LBD39,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00137p00087340 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G67100 | LBD40 | LOB domain-containing protein 40 | 0.06 | OrthoFinder output from all 47 species | |
| AT3G02550 | LBD41 | LOB domain-containing protein 41 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G37540 | LBD39 | LOB domain-containing protein 39 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G67420 | LBD37, ASL39 | LOB domain-containing protein 37 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g024961 | LBD37, ASL39 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g036525 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g041713 | LBD37, ASL39 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g048099 | LBD39 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06478 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g20695 | LBD37, ASL39 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11822 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030772 | LBD38 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034501 | LBD38 | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g13473 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G017400.1 | LBD38, Ceric.08G017400 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G070700.1 | LBD38, Ceric.08G070700 | AS2/LOB-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g15482 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g27884 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011896001 | LBD42 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031035001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_36943 | LBD40 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g03890.1 | LBD41, LOC_Os01g03890 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_70989g0010 | LBD40 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_80122g0010 | LBD42 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04638 | LBD39 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47667 | LBD41 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32695 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04493 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08041 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14153 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07389 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001981_P001 | LBD41, Zm00001e001981 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005129_P001 | LBD37, ASL39,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027415_P001 | LBD41, Zm00001e027415 | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e027417_P001 | LBD41, Zm00001e027417 | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032150_P001 | LBD41, Zm00001e032150 | transcription factor (AS2/LOB) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 4 | 103 |
| No external refs found! |