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  5. LOC_Os01g32170.1

LOC_Os01g32170.1 (LOC_Os01g32170)


Aliases : LOC_Os01g32170

Description : Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana (sp|q9lfm6|pp375_arath : 343.0)


Gene families : OG0030430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0030430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g32170.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT5G11310 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 175
IPR002885 Pentatricopeptide_repeat 181 229
IPR002885 Pentatricopeptide_repeat 286 334
IPR002885 Pentatricopeptide_repeat 381 435
No external refs found!