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  5. LOC_Os01g31580.1

LOC_Os01g31580.1 (LOC_Os01g31580)


Aliases : LOC_Os01g31580

Description : Nitrate regulatory gene2 protein OS=Arabidopsis thaliana (sp|q93yu8|nrg2_arath : 173.0)


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g31580.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00180200 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00040150 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G02110 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
AT4G30130 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
Aspi01Gene68926.t1 Aspi01Gene68926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04779 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g09156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432395g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016372 No alias not classified & original description: CDS=275-2104 0.02 OrthoFinder output from all 47 species
Tin_g05220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006868 DUF630 1 59
IPR006867 DUF632 355 661
No external refs found!