LOC_Os01g31360.2 (LOC_Os01g31360)


Aliases : LOC_Os01g31360

Description : LNK circadian clock transcriptional co-activator


Gene families : OG0003774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003774_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g31360.2

Target Alias Description ECC score Gene Family Method Actions
AT3G54500 No alias BEST Arabidopsis thaliana protein match is: dentin... 0.06 OrthoFinder output from all 47 species
AT5G64170 No alias dentin sialophosphoprotein-related 0.1 OrthoFinder output from all 47 species
Als_g16387 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043219 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
Ceric.19G049900.1 Ceric.19G049900 circadian clock transcriptional co-activator *(LNK) &... 0.05 OrthoFinder output from all 47 species
Dcu_g02002 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000669001 No alias Multi-process regulation.circadian clock.evening element... 0.03 OrthoFinder output from all 47 species
GSVIVT01003080001 No alias Protein LNK1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01003081001 No alias Multi-process regulation.circadian clock.evening element... 0.09 OrthoFinder output from all 47 species
Len_g10352 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
Msp_g15350 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
Ppi_g13024 No alias circadian clock transcriptional co-activator *(LNK) &... 0.04 OrthoFinder output from all 47 species
Solyc01g105120.4.1 Solyc01g105120 LNK circadian clock transcriptional co-activator 0.05 OrthoFinder output from all 47 species
Solyc04g009050.4.1 Solyc04g009050 LNK circadian clock transcriptional co-activator 0.13 OrthoFinder output from all 47 species
Zm00001e001871_P006 Zm00001e001871 LNK circadian clock transcriptional co-activator 0.07 OrthoFinder output from all 47 species
Zm00001e026345_P001 Zm00001e026345 LNK circadian clock transcriptional co-activator 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!