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  5. LOC_Os01g28790.1

LOC_Os01g28790.1 (LOC_Os01g28790)


Aliases : LOC_Os01g28790

Description : no hits & (original description: none)


Gene families : OG0010517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g28790.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00101350 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AT1G20070 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
AT2G25250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT4G32020 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aob_g25996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g080500.2.1 Solyc01g080500 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc08g041860.1.1 Solyc08g041860 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

No external refs found!