LOC_Os01g27740.3 (LOC_Os01g27740)


Aliases : LOC_Os01g27740

Description : no hits & (original description: none)


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g27740.3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00023650 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G04960 No alias Domain of unknown function (DUF3444) 0.02 OrthoFinder output from all 47 species
AT5G18750 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
AT5G27240 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g075700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26382.t1 Aspi01Gene26382 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29526.t1 Aspi01Gene29526 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33331.t1 Aspi01Gene33331 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66629.t1 Aspi01Gene66629 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0103.g044685 No alias not classified & original description: CDS=23-2719 0.03 OrthoFinder output from all 47 species
Cba_g04006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.04 OrthoFinder output from all 47 species
Ceric.25G057400.1 Ceric.25G057400 not classified & original description: pacid=50593970... 0.04 OrthoFinder output from all 47 species
Dac_g07351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g03461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24126 No alias chaperone component *(SDJ) of SUVH-SDJ methylation... 0.02 OrthoFinder output from all 47 species
Ehy_g03863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008568001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01021980001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028708001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_00839 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_17193 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g14996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434613g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434613g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_96489g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002387 No alias not classified & original description: CDS=1-2268 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004721 No alias not classified & original description: CDS=1-2922 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012829 No alias not classified & original description: CDS=1-1290 0.03 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g029220.3.1 Solyc08g029220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028433_P001 Zm00001e028433 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e033340_P001 Zm00001e033340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041003_P001 Zm00001e041003 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 780 982
IPR024593 DUF3444 492 696
IPR001623 DnaJ_domain 67 128
No external refs found!