LOC_Os01g27070.1 (LOC_Os01g27070)


Aliases : LOC_Os01g27070

Description : no hits & (original description: none)


Gene families : OG0001459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001459_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g27070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00180p00057430 evm_27.TU.AmTr_v1... Protein DMP5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G24310 No alias Protein of unknown function (DUF679) 0.02 OrthoFinder output from all 47 species
Aspi01Gene12424.t1 Aspi01Gene12424 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51108.t1 AtDMP7, DMP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G093200.1 Ceric.07G093200 not classified & original description: pacid=50626514... 0.03 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.90 No alias Protein DMP4 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Dde_g38021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023254001 No alias Protein DMP5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_12482g0010 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_45981g0010 No alias Protein DMP4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9964484g0010 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp3g06430.1 No alias Protein DMP5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g11700.1 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mpzg00340.1 No alias Protein DMP5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Smo68629 No alias Protein DMP6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo68639 No alias Protein DMP3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g080490.2.1 DMP2, AtDMP2,... Protein DMP2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g008970.1.1 Solyc10g008970 Protein DMP4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR007770 DMP 55 149
No external refs found!