LOC_Os01g26120.1 (LOC_Os01g26120)


Aliases : LOC_Os01g26120

Description : CASP-like protein 1E1 OS=Oryza sativa subsp. japonica (sp|q9arx2|cspl8_orysj : 253.0)


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g26120.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00158850 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.02 OrthoFinder output from all 47 species
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
GSVIVT01033020001 No alias CASP-like protein 1F2 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01033894001 No alias Casparian strip membrane protein 1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58760.1 LOC_Os04g58760 Casparian strip membrane protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Pir_g03800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g067330.3.1 Solyc01g067330 CASP-like protein 1E1 OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Solyc06g072550.3.1 Solyc06g072550 CASP-like protein 1F1 OS=Vitis vinifera... 0.07 OrthoFinder output from all 47 species
Solyc09g074550.3.1 Solyc09g074550 CASP-like protein 1E1 OS=Glycine max... 0.05 OrthoFinder output from all 47 species
Zm00001e003216_P001 Zm00001e003216 CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.02 OrthoFinder output from all 47 species
Zm00001e006491_P001 Zm00001e006491 Casparian strip membrane protein 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e024279_P001 Zm00001e024279 Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.02 OrthoFinder output from all 47 species
Zm00001e036094_P001 Zm00001e036094 Casparian strip membrane protein 1 OS=Zea mays... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006702 CASP_dom 52 196
No external refs found!