LOC_Os01g25386.1 (EST3, MRP4, ATMRP4,...)

Aliases : EST3, MRP4, ATMRP4, ABCC4, LOC_Os01g25386

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g25386.1
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00226270	MRP6, ATMRP6,...	ABC transporter C family member 8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G30420	ATMRP12, MRP12, ABCC11	multidrug resistance-associated protein 12	0.02	OrthoFinder output from all 47 species
AT3G13080	ABCC3, ATMRP3, MRP3	multidrug resistance-associated protein 3	0.04	OrthoFinder output from all 47 species
AT3G60970	MRP15, ABCC15, ATMRP15	multidrug resistance-associated protein 15	0.03	OrthoFinder output from all 47 species
Adi_g056548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g06181	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g14941	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g29404	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07150	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g10954	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g19281	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27220	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07445	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g16130	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20128	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g44914	AtABCC2, ABCC2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g34007	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g29615	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05227.t2	ATMRP12, MRP12,...	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene16912.t1	MRP9, ABCC9,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene22437.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64352.t2	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007991	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-4125	0.03	OrthoFinder output from all 47 species
Cba_g07486	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g14096	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38812	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g74175	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.21G016300.1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.21G019800.1	EST3, MRP4,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.23G061900.1	ABCC1, ATABCC1,...	subfamily ABCC transporter & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.1	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001254.8	MRP10, ATMRP10, ABCC14	No description available	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.190	ATABCC5, MRP5,...	ABC transporter C family member 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.191	ATMRP12, MRP12, ABCC11	ABC transporter C family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020592.4	ATMRP12, MRP12, ABCC11	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cre03.g174050	ABCC12, MRP13, ATMRP13	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Dac_g15072	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g39648	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47629	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g26331	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21779	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01019467001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_37462	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
LOC_Os03g04920.1	ATABCC5, MRP5,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Len_g40215	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434717g0010	ATABCC5, MRP5,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
MA_380601g0010	MRP6, ATMRP6, ABCC8	ABC transporter C family member 8 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g13400.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Msp_g31848	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g43737	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05007	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g15997	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g29525	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g32692	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g43714	ABCC12, MRP13, ATMRP13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g04405	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g07505	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12952	ATMRP14, ABCC10, MRP14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13013	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29473	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-2715	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004014	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=118-4101	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=1-4845	0.02	OrthoFinder output from all 47 species
Sam_g39021	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo107555	MRP15, ABCC15, ATMRP15	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo171469	MRP6, ATMRP6, ABCC8	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo417771	ATMRP12, MRP12, ABCC11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo99030	MRP6, ATMRP6, ABCC8	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc07g065320.4.1	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Solyc09g075020.3.1	EST3, MRP4,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Solyc10g024420.3.1	MRP9, ABCC9,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Tin_g12692	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g23395	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g45327	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e026288_P002	MRP10, ATMRP10,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	1004	1208
IPR011527	ABC1_TM_dom	349	614
IPR003439	ABC_transporter-like_ATP-bd	1302	1450
IPR003439	ABC_transporter-like_ATP-bd	683	816

External Links

No external refs found!

LOC_Os01g25386.1 (EST3, MRP4, ATMRP4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation