Aliases : OTP84, LOC_Os01g25270
Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana (sp|q7y211|pp285_arath : 599.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os01g27650.1 | LOC_Os01g27650 | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g07050.1 | LOC_Os02g07050 | Pentatricopeptide repeat-containing protein At4g20770... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os02g58330.1 | LPA66, LOC_Os02g58330 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g13230.1 | LOC_Os03g13230 | Pentatricopeptide repeat-containing protein At4g37170... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os03g52475.1 | LOC_Os03g52475 | Pentatricopeptide repeat-containing protein At3g28660... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g38190.2 | LOC_Os05g38190 | Pentatricopeptide repeat-containing protein At2g27610... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os05g50460.1 | LOC_Os05g50460 | Putative pentatricopeptide repeat-containing protein... | 0.11 | OrthoFinder output from all 47 species | |
LOC_Os07g15570.1 | CRR2, LOC_Os07g15570 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os07g46770.1 | LOC_Os07g46770 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g25280.1 | LOC_Os08g25280 | Pentatricopeptide repeat-containing protein At4g39530... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os08g28830.1 | LOC_Os08g28830 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os08g33700.1 | LOC_Os08g33700 | Pentatricopeptide repeat-containing protein At3g47530... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g40920.1 | LOC_Os10g40920 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g24530.1 | LOC_Os11g24530 | Pentatricopeptide repeat-containing protein At2g35030,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e030605_P001 | Zm00001e030605 | Pentatricopeptide repeat-containing protein At1g31430... | 0.33 | OrthoFinder output from all 47 species | |
Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 744 | 867 |
IPR002885 | Pentatricopeptide_repeat | 372 | 400 |
IPR002885 | Pentatricopeptide_repeat | 69 | 99 |
IPR002885 | Pentatricopeptide_repeat | 637 | 668 |
IPR002885 | Pentatricopeptide_repeat | 166 | 212 |
IPR002885 | Pentatricopeptide_repeat | 267 | 313 |
IPR002885 | Pentatricopeptide_repeat | 570 | 616 |
IPR002885 | Pentatricopeptide_repeat | 469 | 516 |
No external refs found! |