LOC_Os01g21650.1 (LOC_Os01g21650)


Aliases : LOC_Os01g21650

Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 135.0)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g21650.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50150 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
Adi_g000733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08491.t1 Aspi01Gene08491 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55382.t1 Aspi01Gene55382 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G000800.1 Ceric.23G000800 not classified & original description: pacid=50611536... 0.02 OrthoFinder output from all 47 species
Ceric.23G005500.1 Ceric.23G005500 not classified & original description: pacid=50609840... 0.02 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017512001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022062001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_41229 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g33394.1 LOC_Os11g33394 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g28160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_749769g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g016020.1.1 Solyc04g016020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g04758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004158 DUF247_pln 72 475
No external refs found!