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  5. LOC_Os01g20000.1

LOC_Os01g20000.1 (LOC_Os01g20000)


Aliases : LOC_Os01g20000

Description : no hits & (original description: none)


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g20000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00084630 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT3G05725 No alias Protein of unknown function (DUF3511) 0.06 OrthoFinder output from all 47 species
AT3G62640 No alias Protein of unknown function (DUF3511) 0.03 OrthoFinder output from all 47 species
Adi_g061690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G034600.1 Ceric.02G034600 not classified & original description: pacid=50586050... 0.03 OrthoFinder output from all 47 species
Dcu_g44844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035043001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os03g61590.1 LOC_Os03g61590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g36810.1 LOC_Os06g36810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g01018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g040730.1.1 Solyc07g040730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g075650.3.1 Solyc09g075650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g049210.1.1 Solyc12g049210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 38 80
No external refs found!