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  5. LOC_Os01g18850.1

LOC_Os01g18850.1 (SPL1, LOC_Os01g18850)


Aliases : SPL1, LOC_Os01g18850

Description : transcription factor (SBP)


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g18850.1

Target Alias Description ECC score Gene Family Method Actions
AT2G47070 SPL1 squamosa promoter binding protein-like 1 0.03 OrthoFinder output from all 47 species
Adi_g113317 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113329 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32302 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01013452001 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_37539 SPL1R2, ATSPL14,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_41517 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009405 SPL12 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097354 prenylation IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 107 180
No external refs found!