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  5. LOC_Os01g18320.1

LOC_Os01g18320.1 (PPOX, HEMG1, PPO1,...)


Aliases : PPOX, HEMG1, PPO1, LOC_Os01g18320

Description : protoporphyrinogen IX oxidase


Gene families : OG0004317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g18320.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00136510 PPOX, HEMG1,... Coenzyme metabolism.tetrapyrrol... 0.02 OrthoFinder output from all 47 species
AT4G01690 PPOX, HEMG1, PPO1 Flavin containing amine oxidoreductase family 0.02 OrthoFinder output from all 47 species
Adi_g086582 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Aev_g03216 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Als_g25650 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Aop_g06666 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010292 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Cba_g03992 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.34G041000.1 PPOX, HEMG1,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Cre09.g396300 PPOX, HEMG1, PPO1 Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder output from all 47 species
Ehy_g03851 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028241001 PPOX, HEMG1, PPO1 Coenzyme metabolism.tetrapyrrol... 0.13 OrthoFinder output from all 47 species
Lfl_g04767 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
MA_10426355g0010 PPOX, HEMG1, PPO1 Protoporphyrinogen oxidase 1, chloroplastic... 0.06 OrthoFinder output from all 47 species
MA_10428751g0010 PPOX, HEMG1, PPO1 Protoporphyrinogen oxidase 1, chloroplastic... 0.08 OrthoFinder output from all 47 species
MA_10434852g0010 PPOX, HEMG1, PPO1 Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Mp1g21340.1 PPOX, HEMG1, PPO1 protoporphyrinogen IX oxidase 0.08 OrthoFinder output from all 47 species
Msp_g08054 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Pir_g08398 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Pp3c1_34400V3.1 PPOX, HEMG1,... Flavin containing amine oxidoreductase family 0.01 OrthoFinder output from all 47 species
Sam_g11858 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g40718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo82264 PPOX, HEMG1, PPO1 Coenzyme metabolism.tetrapyrrol... 0.03 OrthoFinder output from all 47 species
Solyc01g079090.4.1 PPOX, HEMG1,... protoporphyrinogen IX oxidase 0.05 OrthoFinder output from all 47 species
Spa_g12334 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.1 OrthoFinder output from all 47 species
Tin_g02067 PPOX, HEMG1, PPO1 EC_1.3 oxidoreductase acTing on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 65 524
No external refs found!