LOC_Os01g17180.1 (ATCSN2, CSN2, FUS12,...)


Aliases : ATCSN2, CSN2, FUS12, COP12, LOC_Os01g17180

Description : component CSN2 of COP9 signalosome complex


Gene families : OG0004084 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g17180.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g01659 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.13 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.14 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 OrthoFinder output from all 47 species
Cre01.g030800 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Ppi_g06343 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g08824 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 352 474
No external refs found!