LOC_Os07g49100 (Os07g0691100)


Aliases : Os07g0691100

Description : 10.8.1 cell wall.pectin*esterases.PME Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_01_0003679 (Gene family) Phylogenetic Tree(s): OG0003679_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os07g49100
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT3G05610 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.12 Gene family
AT3G06830 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.08 Gene family
AT4G15980 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Gene family
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.08 Gene family
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
GSVIVT01031165001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.1 Gene family
LOC_Os03g18860 Os03g0300500 10.8.1 cell wall.pectin*esterases.PME Plant... 0.03 Gene family
Solyc01g066360.3.1 Solyc01g066360.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.05 Gene family
Solyc01g066390.3.1 Solyc01g066390.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.1 Gene family
Solyc05g054360.3.1 Solyc05g054360.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.04 Gene family
Solyc12g099410.2.1 Solyc12g099410.2 10.8.1 cell wall.pectin*esterases.PME Plant... 0.09 Gene family
Zm00001d022567 GRMZM2G112984 10.8.1 cell wall.pectin*esterases.PME Plant... 0.09 Gene family
Zm00001d028819 GRMZM2G321870 10.8.1 cell wall.pectin*esterases.PME Plant... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 44 192
IPR000070 Pectinesterase_cat 245 541
No external refs found!